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Gepasi

Gepasi is a computer simulation tool that facilitates modeling of biochemical systems, Mass Control Analyses and implementing optimization strategies.

One of the tools strengths as an educational tool is the simple manner in which biochemical reactions can be entered into the tool.

GEPASI: computer simulation of biochemistry.
This site contains links to tutorials and downloading the software. An extensive bibliography list documents the use of Gepasi in research and links to courses illustrate it's use in education.