Computational Cell Biology

Modeling for the cell biologist

Integrating Computational Biology in Undergraduate Education

New Book Available: A Cell Biologist's Guide to Modeling and Bioinformatics.

This web site introduces readers to basic practices of modeling and computational tools for cellular processes. The materials are meant to facilitate the integration of modeling in undergraduate biology curricula as well as serve as a primer for researchers new to modeling.

Getting Started: The examples used in these materials draw primarily on previously published results and freely available software.

Let us know what works for you and what you're looking for!

Sections

Contents

Software/Sites

Resource Links

Modeling

Modeling Process

• Biological Processes

• Kinetics

  • Mass Action

U.S. and International Programs in Computational Science

Sequence Alignments and Databases

Sequence Alignments

Sequence Databases

Protein Family/Domain Databases

NCBI

ExPASy

InterPro

Excercises

Additional tools, sites and materials

Metabolic Pathways

Glycolysis

• Highlights

• Reactions

• Exercises

Presentations

Send any questions or suggestions regarding this web site to Holmes.